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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34205303_34206121_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34205303 - 34206121

Intron Length:

819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGCTG

5'SS Class:

major

3'SS Sequence:

TTGTTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTAGGAC

U12 Branch Point Sequence:

AGGACCGCAGCC

Flanking Amino Acid:

STPRLQYYNKVLRLLDMVGL

Intron Amino Acid Position:

857

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

57.8

46.6

Major BPS

42.9

-0.4

1.5

37.2

42.1

Major PPT

77.3

0.62

0.9

69.5

41.6

Minor 5ss

32.6

-2

3.7

46.8

48.5

Minor BPS

39.1

-0.8

2.2

46.86

41.9

Associated Gene:

Gene:

NUP160

Ensembl Gene ID:

ENSAPLG00000015048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015795

34200546 - 34226056

25511