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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34206242_34206463_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34206242 - 34206463

Intron Length:

222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

GGTGTGCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATGCAC

U12 Branch Point Sequence:

CATGCACGAGCT

Flanking Amino Acid:

CYLVMGEGHKALDCFCQAAS

Intron Amino Acid Position:

817

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

38.2

Major BPS

-0.1

1.3

58.7

38.1

Major PPT

69.6

0.44

58.2

47.3

Minor 5ss

25.5

-2.8

3.5

37.8

47.1

Minor BPS

38.7

-0.7

2.1

56.3

45.2

Associated Gene:

Gene:

NUP160

Ensembl Gene ID:

ENSAPLG00000015048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015795

34200546 - 34226056

25511