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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34211911_34212417_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

34211911 - 34212417

Intron Length:

507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTATCCTTG

5'SS Class:

strong_minor

3'SS Sequence:

AACCTCGGCTCAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TCCTTAA

U12 Branch Point Sequence:

TGTTCCTTAACC

Flanking Amino Acid:

TAIVADFLPLLWPSNPGFLF

Intron Amino Acid Position:

760

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

48.9

-0

1.3

46.6

44.1

Major BPS

69.7

0.49

59.9

38.5

Major PPT

57.7

0.17

53.9

40.5

Minor 5ss

91.9

1.41

28.3

Minor BPS

90.9

1.27

0.8

91.71

27.5

Associated Gene:

Gene:

NUP160

Ensembl Gene ID:

ENSAPLG00000015048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043415

34201916 - 34226021

24106

ENSAPLT00000015795

34200546 - 34226056

25511