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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34214004_34214314_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34214004 - 34214314

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

TTTTCTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

TGTCTCTGCACT

Flanking Amino Acid:

CLASDVPVDTLESNLQHLSV

Intron Amino Acid Position:

683

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

59.2

39.9

Major BPS

71.2

0.53

37.5

Major PPT

87.8

0.85

0.6

81.8

30.3

Minor 5ss

-1.9

41.2

Minor BPS

51.6

0.13

1.9

74.97

41.3

Associated Gene:

Gene:

NUP160

Ensembl Gene ID:

ENSAPLG00000015048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015795

34200546 - 34226056

25511

ENSAPLT00000043415

34201916 - 34226021

24106