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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34215943_34216565_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34215943 - 34216565

Intron Length:

623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGGAGA

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TAATCCTCATCT

Flanking Amino Acid:

QILEDLIANDTDNVMEEIHS

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.3

69.6

42.7

Major BPS

81.8

0.79

1.1

34.5

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

-1.9

3.1

38.8

Minor BPS

61.2

0.43

1.8

78.94

42.5

Associated Gene:

Gene:

NUP160

Ensembl Gene ID:

ENSAPLG00000015048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043415

34201916 - 34226021

24106

ENSAPLT00000015795

34200546 - 34226056

25511