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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34216732_34218366_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34216732 - 34218366

Intron Length:

1635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

GATTCTTTCATT

Flanking Amino Acid:

LMEDDAAILDDLEMSRDVVC

Intron Amino Acid Position:

491

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

74.1

36.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

86.7

0.83

0.7

81.6

28.7

Minor 5ss

32.2

-2

3.1

41.8

Minor BPS

62.7

0.48

1.7

77.58

39.2

Associated Gene:

Gene:

NUP160

Ensembl Gene ID:

ENSAPLG00000015048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043415

34201916 - 34226021

24106

ENSAPLT00000015795

34200546 - 34226056

25511