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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34218467_34218582_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34218467 - 34218582

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCCG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAA

U12 Branch Point Sequence:

GGGAGCTCAAAG

Flanking Amino Acid:

YTSMVCLLKKGSLSFFVPCS

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

63.1

Major BPS

61.8

0.29

1.1

63.4

35.6

Major PPT

0.76

0.7

77.2

31.6

Minor 5ss

25.6

-2.8

30.2

Minor BPS

40.5

-0.8

39.63

43.1

Associated Gene:

Gene:

NUP160

Ensembl Gene ID:

ENSAPLG00000015048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043415

34201916 - 34226021

24106

ENSAPLT00000015795

34200546 - 34226056

25511