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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34218754_34219164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34218754 - 34219164

Intron Length:

411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTGGTCCCGCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCATCTGAATT

Flanking Amino Acid:

KEVTLAVENEFQGSVTEYEC

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

100

1.24

0.5

100

Major PPT

62.2

0.28

55.7

41.3

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

62.8

0.48

1.5

77.05

39.7

Associated Gene:

Gene:

NUP160

Ensembl Gene ID:

ENSAPLG00000015048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043415

34201916 - 34226021

24106

ENSAPLT00000015795

34200546 - 34226056

25511