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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34221417_34221628_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34221417 - 34221628

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAA

U12 Branch Point Sequence:

TGTGTGATAAGA

Flanking Amino Acid:

DHISSLFSSQETLVDFALTS

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

74.9

35.3

Major BPS

58.6

0.22

1.1

59.7

34.6

Major PPT

76.8

0.6

0.7

72.7

25.5

Minor 5ss

33.5

-1.9

3.4

47.6

Minor BPS

40.8

-0.7

2.4

56.02

43.3

Associated Gene:

Gene:

NUP160

Ensembl Gene ID:

ENSAPLG00000015048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043415

34201916 - 34226021

24106

ENSAPLT00000015795

34200546 - 34226056

25511