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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34223577_34224300_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34223577 - 34224300

Intron Length:

724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTGTT

5'SS Class:

major

3'SS Sequence:

CCTGTGCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTCCTTTTAACC

Flanking Amino Acid:

FLTGWMPTAIRGDCGPSDLP

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.2

77.3

37.8

Major BPS

89.7

0.98

0.7

89.9

Major PPT

76.9

0.6

0.9

72.6

37.6

Minor 5ss

33.6

-1.9

3.5

49.5

46.8

Minor BPS

71.3

0.65

1.2

74.92

35.8

Associated Gene:

Gene:

NUP160

Ensembl Gene ID:

ENSAPLG00000015048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043415

34201916 - 34226021

24106

ENSAPLT00000015795

34200546 - 34226056

25511