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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34224380_34224519_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34224380 - 34224519

Intron Length:

140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTTGCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTGCTTTTATTT

Flanking Amino Acid:

VIKLPPHDVPGTVSVVELKQ

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

82.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

0.45

1.2

71.7

42.9

Minor 5ss

35.9

-1.6

3.3

47.8

47.9

Minor BPS

56.1

0.27

1.5

72.24

39.7

Associated Gene:

Gene:

NUP160

Ensembl Gene ID:

ENSAPLG00000015048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043415

34201916 - 34226021

24106

ENSAPLT00000015795

34200546 - 34226056

25511