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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34241627_34241762_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34241627 - 34241762

Intron Length:

136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTCCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGGAT

U12 Branch Point Sequence:

GGATGCTGAGCA

Flanking Amino Acid:

RLDLDAELEAGSEEEDEKRK

Intron Amino Acid Position:

2101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.1

37.9

Major BPS

56.3

0.16

1.6

57.1

49.4

Major PPT

69.4

0.44

0.7

61.6

Minor 5ss

31.4

-2.1

3.6

39.6

45.9

Minor BPS

45.1

-0.3

55.26

42.8

Associated Gene:

Gene:

SPTB

Ensembl Gene ID:

ENSAPLG00000015736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022746

34238106 - 34252019

13914

ENSAPLT00000016431

34238106 - 34252019

13914

ENSAPLT00000043960

34241335 - 34255348

14014

ENSAPLT00000042689

34238106 - 34252019

13914

ENSAPLT00000023092

34236896 - 34252019

15124