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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34242146_34242525_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34242146 - 34242525

Intron Length:

380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

CTGCTGCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

GGCTGCTGAGCG

Flanking Amino Acid:

WQQRWDRLRLLLEVCQFSRD

Intron Amino Acid Position:

2003

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.4

67.1

44.6

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

68.2

0.41

0.9

61.5

34.9

Minor 5ss

37.2

-1.4

3.3

44.7

43.5

Minor BPS

42.9

-0.6

2.1

45.89

Associated Gene:

Gene:

SPTB

Ensembl Gene ID:

ENSAPLG00000015736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042689

34238106 - 34252019

13914

ENSAPLT00000023092

34236896 - 34252019

15124

ENSAPLT00000022746

34238106 - 34252019

13914

ENSAPLT00000016431

34238106 - 34252019

13914

ENSAPLT00000043960

34241335 - 34255348

14014