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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34244729_34244817_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34244729 - 34244817

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCCG

5'SS Class:

strong_major

3'SS Sequence:

GGCCCCGTGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

CTGTCCTGACCC

Flanking Amino Acid:

SVQRLAKRNETLQKELQGHA

Intron Amino Acid Position:

1520

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

71.4

40.3

Major BPS

68.9

0.47

59.2

39.1

Major PPT

55.7

0.13

1.1

49.4

39.3

Minor 5ss

29.1

-2.4

2.7

41.9

Minor BPS

56.5

0.18

1.8

66.89

44.7

Associated Gene:

Gene:

SPTB

Ensembl Gene ID:

ENSAPLG00000015736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042689

34238106 - 34252019

13914

ENSAPLT00000023092

34236896 - 34252019

15124

ENSAPLT00000022746

34238106 - 34252019

13914

ENSAPLT00000016431

34238106 - 34252019

13914

ENSAPLT00000043960

34241335 - 34255348

14014