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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34247315_34247409_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34247315 - 34247409

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGAGG

5'SS Class:

major

3'SS Sequence:

GGACACCCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

CCGTTCTCAGCC

Flanking Amino Acid:

ALEDLDLVQHRLDGLEQEMA

Intron Amino Acid Position:

886

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

0.52

1.5

79.6

35.6

Major PPT

56.5

0.15

47.3

36.1

Minor 5ss

30.3

-2.3

3.3

39.2

46.3

Minor BPS

47.3

-0.2

1.8

53.55

44.6

Associated Gene:

Gene:

SPTB

Ensembl Gene ID:

ENSAPLG00000015736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042689

34238106 - 34252019

13914

ENSAPLT00000023092

34236896 - 34252019

15124

ENSAPLT00000022746

34238106 - 34252019

13914

ENSAPLT00000016431

34238106 - 34252019

13914

ENSAPLT00000043960

34241335 - 34255348

14014