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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34250194_34250266_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34250194 - 34250266

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGCGTC

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCGGGTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACCCAT

U12 Branch Point Sequence:

CCGGGCTGAGCT

Flanking Amino Acid:

STYRTVEKPPKFQEKGNLEV

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

73.4

36.4

Major BPS

52.1

0.05

1.2

62.1

35.8

Major PPT

58.3

0.19

1.1

43.3

Minor 5ss

42.6

-0.8

3.4

59.1

Minor BPS

40.8

-0.6

2.1

51.87

48.6

Associated Gene:

Gene:

SPTB

Ensembl Gene ID:

ENSAPLG00000015736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042689

34238106 - 34252019

13914

ENSAPLT00000023092

34236896 - 34252019

15124

ENSAPLT00000022746

34238106 - 34252019

13914

ENSAPLT00000016431

34238106 - 34252019

13914

ENSAPLT00000043960

34241335 - 34255348

14014