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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34250455_34250521_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34250455 - 34250521

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGACG

5'SS Class:

strong_major

3'SS Sequence:

AGCCCCGCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CCGCTCTCACCG

Flanking Amino Acid:

LEVKGRRLGKVIEHAKETER

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

72.1

39.1

Major BPS

72.7

0.56

30.1

Major PPT

58.5

0.19

0.9

50.2

33.4

Minor 5ss

27.1

-2.6

2.9

31.3

42.6

Minor BPS

42.3

-0.7

1.8

39.85

44.2

Associated Gene:

Gene:

SPTB

Ensembl Gene ID:

ENSAPLG00000015736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023092

34236896 - 34252019

15124

ENSAPLT00000022746

34238106 - 34252019

13914

ENSAPLT00000016431

34238106 - 34252019

13914

ENSAPLT00000043960

34241335 - 34255348

14014

ENSAPLT00000042689

34238106 - 34252019

13914