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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34250895_34250973_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34250895 - 34250973

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCCAC

U12 Branch Point Sequence:

GTGTCCTCCTCT

Flanking Amino Acid:

LAFNALIHKHRPELFEFKTL

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

72.3

37.8

Major BPS

43.9

-0.3

1.4

49.9

45.3

Major PPT

73.3

0.52

0.8

64.5

36.5

Minor 5ss

39.1

-1.2

3.1

52.5

44.7

Minor BPS

39.3

-0.7

3.6

68.92

47.5

Associated Gene:

Gene:

SPTB

Ensembl Gene ID:

ENSAPLG00000015736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016431

34238106 - 34252019

13914

ENSAPLT00000043960

34241335 - 34255348

14014

ENSAPLT00000042689

34238106 - 34252019

13914

ENSAPLT00000023092

34236896 - 34252019

15124

ENSAPLT00000022746

34238106 - 34252019

13914