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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34281399_34281476_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
34281399 - 34281476

Intron Length:
78

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTATGGCGC

5'SS Class:
major

3'SS Sequence:
CTCCTCGCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGCTGAG

U12 Branch Point Sequence:
TGACGCTGAGCC

Flanking Amino Acid:
VLFVCTGFSLNYGVCALGLE

Intron Amino Acid Position:
426

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.8
0.49
1.1
53.1
43.8

Major BPS
46
-0.2
1.6
40.4
42.3

Major PPT
75
0.56
0.8
68.7
31.7

Minor 5ss
37.3
-1.4
3.3
47.3
43.7

Minor BPS
44.2
-0.4
2
55.02
42.2

Associated Gene:

Gene:
UNC93B1

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34280349 - 34283242
2894

34280349 - 34283242
2894