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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34282250_34282315_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
34282250 - 34282315

Intron Length:
66

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCG|GTAGGCAGC

5'SS Class:
major

3'SS Sequence:
CGTCCCGCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGCTGAC

U12 Branch Point Sequence:
GCGGGCTGACCC

Flanking Amino Acid:
LWASVGHYITRMAQKYYEYA

Intron Amino Acid Position:
248

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.9
0.47
1.1
58.4
46.6

Major BPS
49.4
-0
1.3
42.8
41.8

Major PPT
69.3
0.44
0.9
61.6
34.9

Minor 5ss
38.8
-1.3
3.2
51.9
45.1

Minor BPS
39.6
-0.8
2.1
43.13
44.3

Associated Gene:

Gene:
UNC93B1

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34280349 - 34283242
2894

34280349 - 34283242
2894