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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34288188_34288296_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34288188 - 34288296

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGGCAG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAG

U12 Branch Point Sequence:

TGGCACTGAGGT

Flanking Amino Acid:

MKDEHVDKNLVTQLDSAFIR

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

53.2

45.3

Major BPS

48.9

-0

1.5

46.7

38.9

Major PPT

1.1

0.4

13.8

Minor 5ss

28.8

-2.4

3.5

34.3

43.1

Minor BPS

41.2

-0.5

56.53

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013388

34284602 - 34297832

13231

ENSAPLT00000032434

34284602 - 34294838

10237

ENSAPLT00000027648

34284602 - 34297832

13231