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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34289914_34290102_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34289914 - 34290102

Intron Length:

189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGCCAT

U12 Branch Point Sequence:

CAGACCACAGCC

Flanking Amino Acid:

AVYAFSCDSKVVNQVLEKTS

Intron Amino Acid Position:

416

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

72.9

31.4

Major BPS

46.8

-0.2

1.4

53.8

41.9

Major PPT

77.8

0.63

0.7

69.1

31.4

Minor 5ss

33.6

-1.9

41.1

45.4

Minor BPS

40.5

-0.7

1.9

45.92

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032434

34284602 - 34294838

10237