Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_34294286_34294404_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34294286 - 34294404

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTCAGGCTG

5'SS Class:

major

3'SS Sequence:

CATCTCCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

TCCTCTCCATCT

Flanking Amino Acid:

LVPLIGAIAAGNCVVVRPSE

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.4

55.6

48.6

Major BPS

82.2

0.8

0.9

81.6

Major PPT

67.5

0.39

0.8

58.9

32.6

Minor 5ss

30.3

-2.3

3.3

40.3

45.3

Minor BPS

-0.3

2.1

64.33

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022702

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034265

34292340 - 34295408

3069