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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34306836_34306934_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34306836 - 34306934

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

GCTTTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

CTTCCCCGAGCT

Flanking Amino Acid:

RRCEEMEKTFTFLQQELRGA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

63.4

35.3

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

86.1

0.81

0.8

80.6

31.4

Minor 5ss

30.7

-2.2

3.1

41.6

38.8

Minor BPS

47.5

-0.1

71.6

44.6

Associated Gene:

Gene:

TCIRG1

Ensembl Gene ID:

ENSAPLG00000013129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026628

34305664 - 34311596

5933

ENSAPLT00000013685

34305664 - 34311596

5933