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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34307165_34307265_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34307165 - 34307265

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGGGTGCC

5'SS Class:

major

3'SS Sequence:

CCCGGCACCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGCCAC

U12 Branch Point Sequence:

CTCCCCGGCACC

Flanking Amino Acid:

REGQRLTSLPGPPGSPPSSR

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

62.1

38.4

Major BPS

-0.2

1.4

53.5

Major PPT

58.6

0.19

0.9

50.2

32.7

Minor 5ss

27.6

-2.6

3.3

35.7

41.2

Minor BPS

40.7

-0.7

2.4

52.11

45.1

Associated Gene:

Gene:

TCIRG1

Ensembl Gene ID:

ENSAPLG00000013129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026628

34305664 - 34311596

5933

ENSAPLT00000013685

34305664 - 34311596

5933