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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34307361_34307833_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34307361 - 34307833

Intron Length:

473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAAGGGG

5'SS Class:

major

3'SS Sequence:

TGCGTCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAC

U12 Branch Point Sequence:

GCGTCCCCACAG

Flanking Amino Acid:

SVHQHLDRKINFVTGVIHPW

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.1

54.8

42.7

Major BPS

48.9

-0

1.3

58.1

40.4

Major PPT

68.7

0.42

0.9

61.3

35.2

Minor 5ss

29.7

-2.3

3.6

Minor BPS

-1

38.35

Associated Gene:

Gene:

TCIRG1

Ensembl Gene ID:

ENSAPLG00000013129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026628

34305664 - 34311596

5933

ENSAPLT00000013685

34305664 - 34311596

5933