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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34307961_34308037_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34307961 - 34308037

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

ACATTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGACAT

U12 Branch Point Sequence:

CTGACATGAGCT

Flanking Amino Acid:

MPEPLEDPDTGESVTWVIFL

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

54.4

44.7

Major BPS

55.3

0.13

1.3

64.4

41.8

Major PPT

67.6

0.4

58.2

42.4

Minor 5ss

30.8

-2.2

3.3

38.2

46.7

Minor BPS

45.2

-0.2

63.09

46.3

Associated Gene:

Gene:

TCIRG1

Ensembl Gene ID:

ENSAPLG00000013129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026628

34305664 - 34311596

5933

ENSAPLT00000013685

34305664 - 34311596

5933