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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34308121_34308212_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34308121 - 34308212

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CCGTCTGTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGACAC

U12 Branch Point Sequence:

CCCTCCCCGACA

Flanking Amino Acid:

IGQKIRKISDCFHCQVYPYP

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.2

35.9

Major BPS

43.2

-0.4

1.1

37.2

Major PPT

69.1

0.43

0.9

60.4

40.3

Minor 5ss

26.7

-2.7

27.9

37.8

Minor BPS

46.7

-0.2

1.9

55.18

43.9

Associated Gene:

Gene:

TCIRG1

Ensembl Gene ID:

ENSAPLG00000013129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026628

34305664 - 34311596

5933

ENSAPLT00000013685

34305664 - 34311596

5933