Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_34308617_34308956_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34308617 - 34308956

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGGGTGCC

5'SS Class:

major

3'SS Sequence:

GCCCTCCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATCAC

U12 Branch Point Sequence:

TGGGGGTCAGGC

Flanking Amino Acid:

QVQDALRQGSYKSGSSVECF

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

62.1

38.4

Major BPS

53.4

0.09

1.1

57.3

37.7

Major PPT

68.2

0.41

0.8

61.3

29.1

Minor 5ss

27.6

-2.6

3.3

35.7

41.2

Minor BPS

28.4

-1.6

2.4

34.46

41.5

Associated Gene:

Gene:

TCIRG1

Ensembl Gene ID:

ENSAPLG00000013129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026628

34305664 - 34311596

5933

ENSAPLT00000013685

34305664 - 34311596

5933