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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34309108_34309188_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34309108 - 34309188

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGGACC

5'SS Class:

major

3'SS Sequence:

CGTGCTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTGAT

U12 Branch Point Sequence:

GGAGCCCGGAGT

Flanking Amino Acid:

GVASYQEVNPAPYAIITFPF

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

66.9

38.5

Major BPS

55.7

0.14

1.4

49.1

46.3

Major PPT

68.9

0.42

0.9

61.8

34.9

Minor 5ss

28.6

-2.5

36.3

40.5

Minor BPS

39.2

-0.7

51.16

42.5

Associated Gene:

Gene:

TCIRG1

Ensembl Gene ID:

ENSAPLG00000013129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026628

34305664 - 34311596

5933

ENSAPLT00000013685

34305664 - 34311596

5933