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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34309329_34309524_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34309329 - 34309524

Intron Length:

196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TTGCCCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGGTAG

U12 Branch Point Sequence:

GGGGTGGTAGCC

Flanking Amino Acid:

RPSLQQASNEIWQMFFEGRY

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

36.1

-0.8

1.7

28.8

44.9

Major PPT

72.3

0.5

0.8

66.2

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

-1.3

2.4

38.61

40.3

Associated Gene:

Gene:

TCIRG1

Ensembl Gene ID:

ENSAPLG00000013129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026628

34305664 - 34311596

5933

ENSAPLT00000013685

34305664 - 34311596

5933