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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34310044_34310171_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34310044 - 34310171

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

GCCCCCTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAG

U12 Branch Point Sequence:

GCGTGGTGAGCC

Flanking Amino Acid:

FGVLLGVFNHVHFKQRHRLV

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.1

58.8

40.4

Major BPS

46.9

-0.1

1.7

42.8

49.4

Major PPT

61.7

0.26

0.9

52.7

36.7

Minor 5ss

-2.1

2.9

37.9

39.5

Minor BPS

36.4

-1

2.4

43.46

Associated Gene:

Gene:

TCIRG1

Ensembl Gene ID:

ENSAPLG00000013129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026628

34305664 - 34311596

5933

ENSAPLT00000013685

34305664 - 34311596

5933