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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34310386_34310489_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34310386 - 34310489

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCACCT

5'SS Class:

major

3'SS Sequence:

GTGCCGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTAAC

U12 Branch Point Sequence:

GACCCCGTAACG

Flanking Amino Acid:

ADNLPLYEGQVPVQMVLVVL

Intron Amino Acid Position:

638

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.2

44.9

Major BPS

49.8

-0

1.2

52.9

39.1

Major PPT

66.8

0.38

58.4

38.4

Minor 5ss

38.8

-1.3

3.4

57.7

46.5

Minor BPS

49.1

-0.2

2.1

54.93

45.6

Associated Gene:

Gene:

TCIRG1

Ensembl Gene ID:

ENSAPLG00000013129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026628

34305664 - 34311596

5933

ENSAPLT00000013685

34305664 - 34311596

5933