Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_34311260_34311347_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34311260 - 34311347

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCCTG

5'SS Class:

major

3'SS Sequence:

CTTTCCTCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

CGGGTCTCACCG

Flanking Amino Acid:

SAFLHALRLHWVEFQNKFYV

Intron Amino Acid Position:

809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

61.4

44.7

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

76.5

0.6

0.9

73.3

31.6

Minor 5ss

36.2

-1.6

3.2

44.4

Minor BPS

41.3

-0.8

1.9

39.09

44.6

Associated Gene:

Gene:

TCIRG1

Ensembl Gene ID:

ENSAPLG00000013129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026628

34305664 - 34311596

5933

ENSAPLT00000013685

34305664 - 34311596

5933