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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34313052_34313638_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34313052 - 34313638

Intron Length:

587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTCACCGTC

5'SS Class:

weak_major

3'SS Sequence:

GCAGGAATCTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGGTCAT

U12 Branch Point Sequence:

ATTTCCCGAAGG

Flanking Amino Acid:

CCWGADPKGGRPSPPNPAAF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.05

1.5

44.7

Major BPS

51.9

0.05

1.5

57.1

49.4

Major PPT

-0.4

1.7

39.9

42.7

Minor 5ss

41.4

-1

3.3

50.9

45.8

Minor BPS

49.1

-0.2

2.1

63.77

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022457

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037652

34310973 - 34313737

2765