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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34315279_34315672_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34315279 - 34315672

Intron Length:

394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GCACCCCGGTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

TGTAACTGCACC

Flanking Amino Acid:

RRNPSKEGRSSAFRLTGLTN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

67.2

38.1

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

42.4

-0.4

1.7

42.6

38.4

Minor 5ss

26.2

-2.7

3.2

34.3

Minor BPS

46.4

-0.3

2.1

62.34

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013966

34315241 - 34316585

1345