Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_34403902_34404417_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34403902 - 34404417

Intron Length:

516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAA

U12 Branch Point Sequence:

CTCAGCTCAATT

Flanking Amino Acid:

MKSTVSSGTFSQAGSQFSRA

Intron Amino Acid Position:

732

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

62.5

42.3

Major BPS

61.8

0.29

1.1

63.4

35.6

Major PPT

0.9

0.6

22.5

Minor 5ss

35.9

-1.6

3.3

47.1

48.3

Minor BPS

47.5

-0.1

64.39

46.3

Associated Gene:

Gene:

MYRF

Ensembl Gene ID:

ENSAPLG00000006054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006311

34393720 - 34454570

60851

ENSAPLT00000028973

34393720 - 34454570

60851