Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_34409782_34410218_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34409782 - 34410218

Intron Length:

437

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

CGTACCCAAACC

Flanking Amino Acid:

CFYLKLHGVKLEALNQSINI

Intron Amino Acid Position:

446

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.1

0.99

0.9

73.8

42.8

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

87.9

0.85

0.7

80.1

31.9

Minor 5ss

28.5

-2.5

3.8

39.7

45.9

Minor BPS

47.6

-0.2

2.1

60.8

44.1

Associated Gene:

Gene:

MYRF

Ensembl Gene ID:

ENSAPLG00000006054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028973

34393720 - 34454570

60851

ENSAPLT00000006311

34393720 - 34454570

60851