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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34474510_34475217_R


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
34474510 - 34475217

Intron Length:
708

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAAGACTA

5'SS Class:
strong_major

3'SS Sequence:
TTTCTCATTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTCAT

U12 Branch Point Sequence:
TGTTTCTCATTG

Flanking Amino Acid:
ITVDRRNSSTKSKSHSEISL

Intron Amino Acid Position:
689

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.1
0.73
1
74.5
35.9

Major BPS
94.9
1.12
0.6
93.9
14.7

Major PPT
87
0.83
0.7
81.8
28.4

Minor 5ss
37.3
-1.4
3.2
48.7
41.3

Minor BPS
49.8
-0.1
1.9
59.88
42.4

Associated Gene:

Gene:
DAGLA

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34472582 - 34515092
42511

34473582 - 34503484
29903