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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34475400_34476420_R


Intron Information:

Intron Rank:
16

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
34475400 - 34476420

Intron Length:
1021

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAATGCTG

5'SS Class:
major

3'SS Sequence:
TGCCTTGTTATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CAGTGAA

U12 Branch Point Sequence:
TGCCTTGTTATA

Flanking Amino Acid:
PYVVMEGLNKVLENYNKGKT

Intron Amino Acid Position:
629

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.2
0.66
1
66.2
44.9

Major BPS
51.9
0.05
1.2
44.7
38.6

Major PPT
73.6
0.53
0.9
68
37.7

Minor 5ss
34.4
-1.8
3.4
47.3
48.1

Minor BPS
40.2
-0.7
2
47.86
36.5

Associated Gene:

Gene:
DAGLA

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34473582 - 34503484
29903

34472582 - 34515092
42511