Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_34477110_34478127_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34477110 - 34478127

Intron Length:

1018

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCTGGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCATAT

U12 Branch Point Sequence:

TTCTCCATATTC

Flanking Amino Acid:

DVLQRSNKPKWRIIVGATKC

Intron Amino Acid Position:

520

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.6

0.8

84.6

33.3

Major BPS

61.6

0.29

1.1

57.2

40.1

Major PPT

64.7

0.33

1.2

60.9

44.7

Minor 5ss

37.1

-1.5

48.5

47.2

Minor BPS

56.8

0.19

1.9

71.03

40.7

Associated Gene:

Gene:

DAGLA

Ensembl Gene ID:

ENSAPLG00000006415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037489

34472582 - 34515092

42511

ENSAPLT00000006661

34473582 - 34503484

29903