Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_34478201_34479195_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34478201 - 34479195

Intron Length:

995

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

GCTGTTGTAACC

Flanking Amino Acid:

AVVLGKDLVPRIGLSQLEGF

Intron Amino Acid Position:

495

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.4

1.12

0.8

76.1

39.3

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

87.1

0.83

0.7

79.7

32.2

Minor 5ss

29.2

-2.4

3.8

40.8

45.4

Minor BPS

47.2

-0.2

2.1

57.49

42.1

Associated Gene:

Gene:

DAGLA

Ensembl Gene ID:

ENSAPLG00000006415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037489

34472582 - 34515092

42511

ENSAPLT00000006661

34473582 - 34503484

29903