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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34490684_34491375_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
34490684 - 34491375

Intron Length:
692

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGGGTAGA

5'SS Class:
strong_major

3'SS Sequence:
TTGTGACTTACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTGAC

U12 Branch Point Sequence:
TGTTTGTGACTT

Flanking Amino Acid:
RAKRNAVLDEANNDILAFLS

Intron Amino Acid Position:
224

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.1
0.76
0.9
74.1
38.4

Major BPS
71.3
0.53
1.2
63.1
44.5

Major PPT
77.2
0.61
0.9
69.7
40.7

Minor 5ss
28.3
-2.5
2.8
33.2
41.9

Minor BPS
45.2
-0.2
2.3
68.72
42.7

Associated Gene:

Gene:
DAGLA

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34472582 - 34515092
42511

34473582 - 34503484
29903