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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34495995_34499344_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
34495995 - 34499344

Intron Length:
3350

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCG|GTAAAGCAG

5'SS Class:
major

3'SS Sequence:
TTCTTTAATGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
ATTTCTTTAATG

Flanking Amino Acid:
RQRNLRTYNLRHRLEEGQAS

Intron Amino Acid Position:
149

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.6
0.44
1.1
54.2
44.5

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
82
0.72
0.9
78.2
33.9

Minor 5ss
29.9
-2.3
3.4
38.7
46.5

Minor BPS
79.3
0.78
1.1
77.48
33.7

Associated Gene:

Gene:
DAGLA

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34472582 - 34515092
42511

34473582 - 34503484
29903