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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34530288_34531486_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34530288 - 34531486

Intron Length:

1199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTCG

5'SS Class:

major

3'SS Sequence:

GCCGCCTGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTGCT

U12 Branch Point Sequence:

TTCTGCTTCCTC

Flanking Amino Acid:

RNRGLDMKSFLEGRMVVLSL

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

65.7

40.8

Major BPS

36.1

-0.8

4.3

65.3

43.7

Major PPT

54.2

0.1

1.1

49.1

39.3

Minor 5ss

43.4

-0.7

2.8

60.7

43.5

Minor BPS

37.6

-0.9

3.7

61.11

45.2

Associated Gene:

Gene:

SYT7

Ensembl Gene ID:

ENSAPLG00000006747

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007017

34529713 - 34536027

6315