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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34544209_34544276_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34544209 - 34544276

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

TTCTCTCCCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACGCAT

U12 Branch Point Sequence:

CCCCCTCCAACA

Flanking Amino Acid:

VILPAAPGQPLGASTTTTHY

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.6

0.27

1.1

50.1

40.9

Major BPS

49.9

-0

1.3

37.5

Major PPT

81.6

0.71

0.7

77.1

24.9

Minor 5ss

36.6

-1.5

3.1

53.3

43.4

Minor BPS

43.9

-0.4

1.8

49.2

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021531

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043461

34542365 - 34546350

3986