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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34550105_34551947_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34550105 - 34551947

Intron Length:

1843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCTCCCCTCACG

Flanking Amino Acid:

DIYADEEFNQDSEFSNADQM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

78.5

0.64

0.7

72.8

25.3

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

46.3

-0.4

2.2

53.26

47.2

Associated Gene:

Gene:

CPSF7

Ensembl Gene ID:

ENSAPLG00000006963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029850

34549889 - 34555616

5728

ENSAPLT00000007223

34549889 - 34555747

5859