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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34552167_34552381_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34552167 - 34552381

Intron Length:

215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTGCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

CTGACGGCAGCC

Flanking Amino Acid:

AAVYVGSFSWWTTDQQLIQT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.9

35.3

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

68.2

0.41

0.9

61.5

34.9

Minor 5ss

29.4

-2.4

3.1

33.3

41.7

Minor BPS

32.6

-1.3

2.5

42.78

44.4

Associated Gene:

Gene:

CPSF7

Ensembl Gene ID:

ENSAPLG00000006963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029850

34549889 - 34555616

5728

ENSAPLT00000007223

34549889 - 34555747

5859