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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34554578_34554672_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34554578 - 34554672

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCGCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCCAT

U12 Branch Point Sequence:

TCCCCCCCCACC

Flanking Amino Acid:

GKAMAPYNHSSRELGPPPPA

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

68.5

38.7

Major BPS

52.1

0.05

1.2

62.1

35.8

Major PPT

70.8

0.47

0.9

65.6

Minor 5ss

30.3

-2.3

3.3

46.8

Minor BPS

42.3

-0.6

2.2

52.85

44.5

Associated Gene:

Gene:

CPSF7

Ensembl Gene ID:

ENSAPLG00000006963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029850

34549889 - 34555616

5728

ENSAPLT00000007223

34549889 - 34555747

5859