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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34564123_34564229_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34564123 - 34564229

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCGTGTCTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAG

U12 Branch Point Sequence:

TGGCGCTCAGCC

Flanking Amino Acid:

GGAAPGDRTMLDSLCAAAQA

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

47.4

-0.1

1.6

54.7

43.1

Major PPT

70.2

0.45

0.9

60.8

40.2

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

43.1

-0.5

2.1

53.13

Associated Gene:

Gene:

TKFC

Ensembl Gene ID:

ENSAPLG00000017549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028681

34559958 - 34566947

6990

ENSAPLT00000028321

34562787 - 34566947

4161

ENSAPLT00000027437

34562787 - 34566947

4161

ENSAPLT00000036891

34562787 - 34566947

4161